shapepipe/pyproject.toml at develop · CosmoStat/shapepipe · GitHub

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[project]
name = "shapepipe"
version = "1.1.0"
description = "Galaxy shape measurement pipeline."
readme = "README.rst"
authors = [
    { name = "Samuel Farrens", email = "samuel.farrens@cea.fr" },
    { name = "Axel Guinot", email = "axel.guinot@cea.fr" },
    { name = "Martin Kilbinger", email = "martin.kilbinger@cea.fr" }
]
license = { "file" = "LICENSE" }
requires-python = ">=3.12"
# Abstract runtime constraints. Exact versions live in `uv.lock` — pyproject
# is the single source of truth for *what* shapepipe needs, the lockfile for
# *which versions*. Minimums signal the major-version target; uv.lock pins
# the actual installed versions. Bump minimums only when crossing a major
# version line or when a feature actually requires a specific release.
dependencies = [
    "astropy>=7.0",          # major 6 → 7
    "astroquery",
    "canfar",
    "cs_util>=0.1.9",
    "galsim>=2.8",
    "h5py",
    "joblib>=1.4",
    "matplotlib>=3.10",
    "mccd>=1.2.4",
    "modopt>=1.6",
    "mpi4py>=4.0",
    "numba>=0.59",           # numpy 2 support
    "numpy>=2.0",            # major 1 → 2
    "pandas>=3.0",           # major 2 → 3
    "python-dateutil",
    "python-pysap>=0.3",
    "PyQt5",
    "pyqtgraph",
    "reproject>=0.19",
    "sf_tools>=2.0.4",
    "skaha>=1.7",
    "sqlitedict>=2.0",
    "termcolor",
    "tqdm>=4.63",
    "vos>=3.6",
    # ngmix is pinned to Axel's stable_version branch until upstream ngmix
    # absorbs the fixes — tracked separately, do not modernize this line.
    "ngmix @ git+https://github.com/aguinot/ngmix@stable_version",
]


[project.optional-dependencies]
doc = [
    "myst-parser",
    "numpydoc",
    "sphinx",
    "sphinxcontrib-bibtex",
    "sphinx-book-theme"
]
jupyter = [
    "ipython>=8.18",
    "jupyterlab>=4.3",
    "snakemake>=8.27",
]
lint = [
    "black",
    "isort"
]
release = [
    "build",
    "twine",
]
test = [
    "pytest>=8.3",
    "pytest-cov>=5.0",
    "pytest-pycodestyle>=2.4",
    "pytest-pydocstyle>=2.4",
]
fitsio = ["fitsio"]
dev = ["shapepipe[doc,jupyter,lint,release,test,fitsio]"]

[project.scripts]
shapepipe_run = "shapepipe.shapepipe_run:main"
summary_run = "shapepipe.summary_run:main"
canfar_submit_job = "shapepipe.canfar_run:run_job"
canfar_monitor = "shapepipe.canfar_run:run_log"
canfar_monitor_log = "shapepipe.canfar_run:run_monitor_log"

[tool.pytest.ini_options]
addopts = "--verbose --cov=shapepipe"
testpaths = ["shapepipe"]