enable_git/check_git.sh at main · Kleen-Lab/enable_git · GitHub

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#!/bin/zsh

#User steps required
#-) curl command to download this script from a public repo (raw access) in a PARTICULAR folder
########     curl -L -o ~/Documents/check_git.sh https://raw.githubusercontent.com/Kleen-Lab/fetch_clip_setup/refs/heads/main/check_git.sh
#-) execute command to run this script via command line
########     ~/Documents/check_git.sh
#-) curl -L -o ~/Documents/ssh_key_gen.sh https://raw.githubusercontent.com/Kleen-Lab/enable_git/refs/heads/main/ssh_key_gen.sh
########     ~/Documents/ssh_key_gen.sh


# Function to check if Git is installed
check_git_installed() {
    if command -v git &>/dev/null; then
        echo "Git is already installed."
        return 0
    else
        echo "Git is not installed. Installing Git..."
        return 1
    fi
}

# Function to install Git using Xcode Command Line Tools
install_git() {
    # This command installs the Xcode Command Line Tools, which includes Git
    xcode-select --install

    # Check if the installation was successful
    if [ $? -eq 0 ]; then
        echo "Xcode Command Line Tools installation initiated."
        echo "Please follow any on-screen prompts to complete the installation."
    else
        echo "Failed to initiate Xcode Command Line Tools installation."
        exit 1
    fi
}

# Main script execution
check_git_installed || install_git

mkdir -p ~/Desktop/kleen_lab_github/

cd ~/Desktop/kleen_lab_github/

git clone git@github.com:Kleen-Lab/fetch_clip_setup.git
cd fetch_clip_setup
git pull
#making all files executable in the current directory
chmod +rx *

echo "Sudo permission to make all files executable in fetch_clip"
sudo chmod +rx *

cd ..

./fetch_clip_setup/install_anaconda.sh
source ~/.zshrc

echo "_______________________________________________________________________________________________________________"
echo "###############################################################################################################"
echo "completed the installation of anaconda, taking care of finding the right python version now"

./fetch_clip_setup/python3.11_check.sh

echo "_______________________________________________________________________________________________________________"
echo "###############################################################################################################"
#echo "completed the installation of python3.10 version, generating ssh key for interaction w other private git repos"

#./fetch_clip_setup/ssh_key_gen.sh
#
#echo "_______________________________________________________________________________________________________________"
#echo "###############################################################################################################"
#echo "completed ssh key setup for github, moving on to running make_fetch_clip_env for virtual environment setup..."

echo "completed the installation of python3.10 version, moving on to running make_fetch_clip_env for virtual environment setup..."
./fetch_clip_setup/make_fetch_clip_env.sh


echo "_______________________________________________________________________________________________________________"
echo "###############################################################################################################"
echo "completed the creation of the virtual environment, moving on to for_launch operations"

./fetch_clip_setup/for_launch_ops.sh

echo "_______________________________________________________________________________________________________________"
echo "###############################################################################################################"
echo "completed the for_launch ops, moving on to the ssh installation process"

./fetch_clip_setup/seahorse_setup.sh

echo "_______________________________________________________________________________________________________________"
echo "###############################################################################################################"
echo "completed the seahorse setup, moving on to the sshfs installation process"

echo "Before you get directed to sshfs, please make sure you read the sshfs installation guideline provide on the github page (y/n):"
read end_prompt

if command -v sshfs >/dev/null 2>&1; then
    echo "Looks like you already have sshfs installed in your system."
else
    echo "sshfs is NOT installed."
    curl -L -o ~/Desktop/kleen_lab_github/sshfs-2.5.0.pkg https://github.com/osxfuse/sshfs/releases/download/osxfuse-sshfs-2.5.0/sshfs-2.5.0.pkg
    open ~/Desktop/kleen_lab_github/sshfs-2.5.0.pkg
fi