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Update publications.yml
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_data/publications.yml

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preprint: true
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scvitools: false
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- authors: "C. Wang\\*, A. Wagner\\*, J. Fessler\\*, D. DeTomaso, S. Zaghouani, Y. Zhou, K. Pierce, RA. Sobel, C. Clish, Nir Yosef†, VK. Kuchroo†"
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title: "The glycolytic reaction PGAM unexpectedly restrains Th17 pathogenicity and Th17-dependent autoimmunity"
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details: bioRxiv
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pmid:
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pmcid:
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openaccess:
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doi: 10.1101/2024.08.18.607992v1
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file:
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filetype:
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biorxiv: https://www.biorxiv.org/content/10.1101/2024.08.18.607992v1
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arxiv:
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contentshare:
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preprint: true
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scvitools: false
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- authors: "S. Prillo, A. Ravoor, N. Yosef†, YS. Song†"
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title: "ConvexML: Scalable and accurate inference of single-cell chronograms from CRISPR/Cas9 lineage tracing data"
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preprint: false
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scvitools: true
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- authors: "C. Wang\\*, A. Wagner\\*, J. Fessler\\*, D. DeTomaso, S. Zaghouani, Y. Zhou, K. Pierce, RA. Sobel, C. Clish, Nir Yosef†, VK. Kuchroo†"
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title: "The glycolytic reaction PGAM unexpectedly restrains Th17 pathogenicity and Th17-dependent autoimmunity"
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details: Cell Reports (accepted)
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year: 2025
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pmid:
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pmcid:
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openaccess:
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doi: 10.1101/2024.08.18.607992v1
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file:
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filetype:
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biorxiv: https://www.biorxiv.org/content/10.1101/2024.08.18.607992v1
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arxiv:
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contentshare:
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preprint: false
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scvitools: false
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- authors: "A. Bakulin, N. Levy, C. Ergen, J. Maaskola, N. Yosef"
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title: "Nolan: self-supervised framework for mapping continuous tissue organization"
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details: MLGenX
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year: 2025
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pmid:
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pmcid:
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openaccess:
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doi: 1
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file:
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filetype:
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github:
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biorxiv:
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arxiv: https://openreview.net/forum?id=DzlhvkuFqz
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contentshare:
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preprint: false
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scvitools: false
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- authors: "A. Bakulin, P. Boyeau, N. Yosef"
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title: "AI Agent for Data-Driven Hypothesis\\ Exploration in Single-Cell Transcriptomics"
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details: MLGenX
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year: 2025
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pmid:
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pmcid:
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openaccess:
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doi:
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file:
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filetype:
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github:
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biorxiv:
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arxiv: https://openreview.net/forum?id=DjxLkshuSx
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contentshare:
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preprint: false
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scvitools: false
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- authors: "A. Bakulin, P. Boyeau, N. Yosef"
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title: "AI Agent for Data-Driven Hypothesis\\ Exploration in Single-Cell Transcriptomics"
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details: MLGenX
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year: 2025
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pmid:
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pmcid:
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openaccess:
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doi:
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file:
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filetype:
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github:
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biorxiv:
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arxiv: https://openreview.net/forum?id=DjxLkshuSx
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contentshare:
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preprint: false
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scvitools: false
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- authors: "A. Rodov, H. Baniadam, R. Zeiser, I. Amit, N. Yosef, T. Wertheimer, F. Ingelfinger"
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title: "Towards the Next Generation of Data-Driven Therapeutics Using Spatially Resolved Single-Cell Technologies and Generative AI"
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details: European journal of immunology

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