camml-tutorials/myst.yml at main · ddmms/camml-tutorials · GitHub

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version: 1
project:
  title: CaMML School training material
  authors:
    - name: The CaMML School Collective
  copyright: 2023-2026
#  bibliography:
#    - references.bib
  toc:
    - file: intro.md
    - title: Introduction
      children:
        - file: setup.md
    - title: Day 1
      children:
        - file: notebooks/01-intro/tutorial.ipynb
          title: Basics of Machine Learning
    - title: Day 2 - Unsupervised
      children:
        - file: notebooks/08-unsupervised/tutorial_1_H2.ipynb
        - file: notebooks/08-unsupervised/tutorial_2_EC_EC.ipynb
        - file: notebooks/08-unsupervised/tutorial_3_Li_EC.ipynb
    - title: Day 2 - Bayesian Optimisation
      children:
        - file: notebooks/02-bayesian-optimisation/CAMMLS_BOFire.ipynb
        - file: notebooks/02-bayesian-optimisation/synthetic_examples/synthetic_example.ipynb
        - file: notebooks/02-bayesian-optimisation/synthetic_examples/visualization.ipynb
    - title: Day 3
      children:
        - file: notebooks/03-nn-materials/mlp-from-scratch-numpy-teaching.ipynb
          title: MLP From Scratch (Teaching)
        - file: notebooks/03-nn-materials/conv-nets-torch-students.ipynb
        - file: notebooks/03-nn-materials/conv-filter.ipynb
        - file: notebooks/03-nn-materials/neural-nets-students.ipynb
        - file: notebooks/04-cgcnn/graph-networks.ipynb
    - title: Day 4
      children:
        - file: notebooks/07-mlips/T01_MACE_Practice_I.ipynb
        - file: notebooks/07-mlips/T02_MACE_Practice_II.ipynb
        - file: notebooks/07-mlips/T03_MLIP_Apps.ipynb
        - file: notebooks/07-mlips/T04_MACE_neb.ipynb
    - title: Day 5
      children:
        - file: notebooks/05-generative/diffusion-fundamentals.ipynb
        - file: notebooks/05-generative/crystal-diffusion-from-scratch.ipynb
        - file: notebooks/05-generative/mattergen-crystals.ipynb
        - file: notebooks/05-generative/chemeleon-crystals.ipynb
site:
  options:
    logo: logo.png
    folders: true
  template: book-theme