rcps-buildscripts/R-aristotle_sync at master · themkots/rcps-buildscripts · GitHub

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#!/usr/bin/env bash

###############################################
# Syncs ~ccspapp/Scratch/R/<R-version> from Legion to Aristotle
#
# Default R vesion is 3.4.0-OpenBLAS
#
# by Brian Alston, August 2016
#
# Updated June 2017 for R 3.4.0

VERSION=${VERSION:-3.4.0-OpenBLAS}
INSTALL_PREFIX=${INSTALL_PREFIX:-~ccspapp/Scratch/R/}
REM_PREFIX=${REM_PREFIX:-Scratch/R}

COPY_CMD=scp

if  [ $# -gt 1 ]
then
    echo "R-aristotle_sync: *** ERROR *** wrong number of arguments"
    echo ""
    echo "  usage: R-aristotle_sync [R version eg 3.3.0-OpenBLAS]"
    exit 1
fi
if [ $# == 1 ]
then
   VERSION=$1
fi

mkdir -p $INSTALL_PREFIX
cd $INSTALL_PREFIX
echo Copying using: scp -r ccspapp@login05.external.legion.ucl.ac.uk:$REM_PREFIX/R-$VERSION .
scp -r ccspapp@login05.external.legion.ucl.ac.uk:$REM_PREFIX/R-$VERSION .
ls -l
du -hs *
echo "Done."