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Update sbol2build.py #13

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Merged
Gonza10V merged 2 commits into from
Jun 20, 2025
Merged

Update sbol2build.py #13

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00fdde1
Update sbol2build.py
Gonza10V Jun 20, 2025
2c0a53a
Update sbol2build.py
Gonza10V Jun 20, 2025
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5 changes: 3 additions & 2 deletions src/sbol2build/sbol2build.py
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Original file line number Diff line number Diff line change
Expand Up @@ -21,7 +21,7 @@ def rebase_restriction_enzyme(name:str, **kwargs) -> sbol2.ComponentDefinition:
cd = sbol2.ComponentDefinition(name)
cd.types = sbol2.BIOPAX_PROTEIN
cd.name = name
cd.roles = []
cd.roles = ["http://identifiers.org/obi/OBI:0000732"]
cd.wasDerivedFrom = definition
cd.description = f'Restriction enzyme {name} from REBASE.'
return cd
Expand Down Expand Up @@ -515,6 +515,7 @@ def ligation(reactants:List[sbol2.ComponentDefinition], assembly_plan: sbol2.Mod

ligase_component = sbol2.FunctionalComponent(uri="T4_Ligase")
ligase_component.definition = ligase
ligase_component.roles = ["http://identifiers.org/ncit/NCIT:C16796"]
assembly_plan.functionalComponents.add(ligase_component)

modifier_participation = sbol2.Participation(uri='ligation')
Expand Down Expand Up @@ -752,4 +753,4 @@ def run(self) -> List[Tuple[sbol2.ComponentDefinition, sbol2.Sequence]]:

append_extracts_to_doc(self.composites, self.document)

return self.composites
return self.composites