ODEProblemLibrary-v1.2.2

ODEProblemLibrary ODEProblemLibrary-v1.2.2

Merged pull requests:

• Add testing with v0.6 on Travis and AppVeyor (#1) (@ScottPJones)
• Update CI URLs to point to new caching infrastructure (#2) (@staticfloat)
• Fix some typos (#3) (@ScottPJones)
• fix pleiades typo, export the function. (#6) (@miguelraz)
• Add some DDE problems from DelayDiffEq.jl (#9) (@devmotion)
• Fix deprecations (#12) (@femtocleaner[bot])
• Improve and add DDE problems (#13) (@devmotion)
• Add parameters to history function (#14) (@devmotion)
• WIP: Add more stiff ODE problems (#15) (@YingboMa)
• Fix Van der Pol problem (#19) (@YingboMa)
• add JumpProblems to library (#20) (@isaacsas)
• adding multistate network example (#21) (@isaacsas)
• Fix analytical solutions in BigFloat (#22) (@YingboMa)
• added jump examples used in benchmarking (#23) (@isaacsas)
• add diffusion by CTRW example (#24) (@isaacsas)
• Use submodules (#27) (@YingboMa)
• Fix CI error (#28) (@YingboMa)
• Make DiffEqProblemLibrary repeat safe (#29) (@YingboMa)
• fix more depwarns (#30) (@ChrisRackauckas)
• Mass matrix hotfix (#31) (@MSeeker1340)
• srand -> Random.seed! (#32) (@YingboMa)
• Fix deprecations (#33) (@femtocleaner[bot])
• Add CITATION.bib (#36) (@asinghvi17)
• Create ODE_Nonlinear_system_of_reactions_with_an_analytical_solution (#37) (@EdelmanJonathan)
• Add Project.toml and update Appveyor script (#38) (@devmotion)
• Add DDETST problems and restructure existing DDE problems (#39) (@devmotion)
• Change interface of analytical DDE solutions (#42) (@devmotion)
• Replace ParameterizedFunctions with ModelingToolkit (#44) (@ChrisRackauckas)
• Fix and add DDE problems (#46) (@devmotion)
• Fix typo (#48) (@devmotion)
• fix Brusselator Problem (#50) (@kanav99)
• CompatHelper: add new compat entry for "DiffEqBiological" at version "4.0" (#52) (@github-actions[bot])
• CompatHelper: add new compat entry for "ModelingToolkit" at version "0.9" (#53) (@github-actions[bot])
• CompatHelper: bump compat for "ModelingToolkit" to "0.10" (#54) (@github-actions[bot])
• Update Project.toml (#55) (@ChrisRackauckas)
• Fix latex in docstrings (#57) (@kanav99)
• Install TagBot as a GitHub Action (#58) (@JuliaTagBot)
• Update ode_simple_nonlinear_prob.jl (#59) (@mforets)
• CompatHelper: bump compat for "ModelingToolkit" to "2.0" (#60) (@github-actions[bot])
• CompatHelper: bump compat for "ModelingToolkit" to "3.0" (#61) (@github-actions[bot])
• alpha-beta in SDE problem docstring (#62) (@frankschae)
• Remove Wfact (#63) (@YingboMa)
• update reaction_network to remove custom types (#64) (@isaacsas)
• update jump problems for catalyst (#66) (@isaacsas)
• Fix Van der Pol equations (#67) (@YingboMa)
• CompatHelper: bump compat for "ModelingToolkit" to "4.0" (#68) (@github-actions[bot])
• CompatHelper: bump compat for "Catalyst" to "6.0" (#69) (@github-actions[bot])
• MassInstallAction: Install the TagBot workflow on this repository (#70) (@christopher-dG)
• MassInstallAction: Install the GitHubActionsCI workflow on this repository (#72) (@christopher-dG)
• CompatHelper: bump compat for "ModelingToolkit" to "5.0" (#73) (@github-actions[bot])
• Fixed typo in vanstiff docstring (#75) (@nathanaelbosch)
• add parameters to diffusion network (#76) (@isaacsas)
• Fixed typo in Pleiades problem (docstring) (#77) (@hellmrf)
• update to latest MTK and Catalyst (#78) (@anandijain)
• add common strange attractor systems and problems (#79) (@anandijain)
• CI for LTS (#80) (@ChrisRackauckas)
• Fix radar5 docstring (#81) (@ErikQQY)
• update MTK (#82) (@isaacsas)
• CompatHelper: bump compat for Catalyst to 12, (keep existing compat) (#84) (@github-actions[bot])
• Use JuliaFormatter with SciML style (#88) (@devmotion)
• Split DiffEqProblemLibrary into subpackages (#89) (@devmotion)
• Test master (#90) (@ChrisRackauckas)
• Fix and test undefined exports (#91) (@devmotion)
• Fix bug in prob_dde_constant_2delays_oop (#92) (@devmotion)
• Fix interaction between precompilation and runtimegeneratedfunctions (#93) (@ChrisRackauckas)
• set the built module for the functions to fix precompilation (#94) (@ChrisRackauckas)
• Remove precompilation for MTK support (#95) (@ChrisRackauckas)
• Correct spelling of Lotka-Volterra (#97) (@nathanaelbosch)
• MassInstallAction: Install the Invalidations workflow on this repository (#98) (@devmotion)
• Add transistor amplifier DAE problem (#100) (@ErikQQY)
• [skip ci] spelling (#101) (@ArnoStrouwen)
• no deo bruss (was wrong anyway) (#103) (@xtalax)
• [skip ci] fix link warning (#105) (@ArnoStrouwen)
• enable dependabot for GitHub actions (#106) (@ranocha)
• Test Latexify v0.16 (#107) (@ChrisRackauckas)
• Add BVProblemLibrary (#108) (@ErikQQY)
• Add nonlinear BVP test problems (#109) (@ErikQQY)
• Add the rest BVP test prblems (#110) (@ErikQQY)
• Allow Catalyst v13 (#111) (@ChrisRackauckas)
• Fix array construction in oval problem (#112) (@gaurav-arya)
• Update jump problems to Catalyst 13 (#113) (@isaacsas)
• Move 23 test problems over from NonlinearSolve.jl (#115) (@avik-pal)
• Bump actions/checkout from 3 to 4 (#116) (@dependabot[bot])
• Refactor SDEProblem constructor (#117) (@ErikQQY)
• Update Project.toml (#118) (@avik-pal)
• Refactor BVProblemLibrary with new constructor (#120) (@ErikQQY)
• Fix bugs in BVP test problems (#121) (@ErikQQY)
• Patch Watson Function (#122) (@avik-pal)
• Bump codecov/codecov-action from 3 to 4 (#123) (@dependabot[bot])
• ci: explicitly specify token for codecov (#124) (@thazhemadam)
• Run JuliaFormatter.format() (#125) (@LilithHafner)
• Update to ModelingToolkit v9 (#126) (@ChrisRackauckas)
• Run JuliaFormatter.format() (#127) (@LilithHafner)
• Fix 13th and 17th BVP test problems (#128) (@ErikQQY)
• Bump julia-actions/setup-julia from 1 to 2 (#129) (@dependabot[bot])
• Bump julia-actions/cache from 1 to 2 (#130) (@dependabot[bot])
• Bump ModelingToolkit v9 Catalyst v14 (#131) (@ChrisRackauckas)
• update jumps for Catalyst 14 (#132) (@isaacsas)
• ci: standardize workflows using SciML's reusable workflows (#133) (@thazhemadam)
• Precompile the problem libraries again (#135) (@ChrisRackauckas)
• Fix parameters in prob_bvp_nonlinear_6 (#137) (@ErikQQY)
• feat: improve performance of the nonlinear functions (#138) (@avik-pal)
• Properly use symbolic constructors (#139) (@ChrisRackauckas)
• Fix strange_attractors.jl eval module (#140) (@ChrisRackauckas)
• refactor: update to MTKv10 (#141) (@AayushSabharwal)
• Bump Jump problems to Catalyst v15 (#142) (@ChrisRackauckas)
• Update BVProblemLibrary (#144) (@ChrisRackauckas)
• stop supporting MTK@9 (#145) (@oscardssmith)
• Fix ModelingToolkit v10 compatibility (#147) (@ChrisRackauckas)
• Add spell checking configuration (#148) (@ChrisRackauckas)
• Add downgrade CI workflow (#150) (@ChrisRackauckas)
• Fix Latexify deprecation warnings in ODEProblemLibrary (#151) (@ChrisRackauckas)
• Apply JuliaFormatter to fix code formatting (#152) (@ChrisRackauckas)
• Remove ModelingToolkit dependency from ODEProblemLibrary for faster compilation (#154) (@ChrisRackauckas-Claude)
• Remove Catalyst dependency from SDEProblemLibrary (#156) (@ChrisRackauckas-Claude)
• Fix Van der Pol Jacobian calculation (#159) (@ChrisRackauckas-Claude)
• Fix backslash in TeX in BVProblemLibrary.jl (#161) (@abhro)
• Bump compat bounds for nested problem libraries (#162) (@abhro)
• Use @doc_str macro for docstrings (#163) (@abhro)
• Dedent docstrings in JumpProblemLibrary (#164) (@abhro)

Closed issues:

• check problem name spelling (#4)
• BigFloat segfault (#7)
• Nonlinear system of reactions with an analytical solution (#8)
• Switch to JLD2 (#10)
• DDETST Equations (#11)
• BVP Test Problems (#16)
• Submodules (#25)
• Error tagging new release (#26)
• Register (#40)
• Register (#41)
• Register (#43)
• Register (#45)
• Register (#47)
• Incremental compilation may be fatally broken for this module (#51)
• TagBot trigger issue (#71)
• Typo in the vanstiff docstring (#74)
• Split into subpackages? (#87)
• prob_ode_lotkavoltera should be called prob_ode_lotkavolterra (#96)
• compats deactivated (#104)