Update colocboost and univariate pipeline (very few changes)#1324
Merged
Conversation
Changed `colocboost_analysis_pipeline` to `colocboost_pipeline`. See PR/494 in StatFunGen/pecotmr (StatFunGen/pecotmr#494) for rationale and detailed changes.
xueweic
changed the title
remove region from other quantities and add region as an input parameter to univariate analysis pipeline in pecotmr
This file contains hidden or bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
Sign up for free
to join this conversation on GitHub.
Already have an account?
Sign in to comment
2 participants
Add this suggestion to a batch that can be applied as a single commit.This suggestion is invalid because no changes were made to the code.Suggestions cannot be applied while the pull request is closed.Suggestions cannot be applied while viewing a subset of changes.Only one suggestion per line can be applied in a batch.Add this suggestion to a batch that can be applied as a single commit.Applying suggestions on deleted lines is not supported.You must change the existing code in this line in order to create a valid suggestion.Outdated suggestions cannot be applied.This suggestion has been applied or marked resolved.Suggestions cannot be applied from pending reviews.Suggestions cannot be applied on multi-line comments.Suggestions cannot be applied while the pull request is queued to merge.Suggestion cannot be applied right now. Please check back later.
Changed
colocboost_analysis_pipelinetocolocboost_pipeline. See PR/494 in StatFunGen/pecotmr ([Important update] Design Shared pecotmr QC and ColocBoost Analysis Work pecotmr#494) for rationale and detailed changes.Add region and conditional id to univaraite analysis pipeline other quantities -> will be used for top loci table export, related to PR/504 in StatFunGen/pecotmr(Unify compact top-loci export and SuSiE-Inf as the option for univaraite pipeline pecotmr#504) for rationale and detailed changes.