RNAvigate is a toolset to explore, compare, and visualize chemical probing data, structure models, and annotations between experimental samples.
For non-coders, RNAvigate is designed to be easy to learn. Reach out to me if you want help onboarding for your group. Using RNAvigate in a Jupyter Notebook will transform how you explore data, document thoughts, and share transparent and reproducible analyses.
For coders, RNAvigate is extremely flexible and a great package for scripting and standardizing plots and analyses as part of a bigger workflow.
Coders and non-coders, reach out if you have any comments or issues at all! I love to help users and to learn how you are using this tool. I may be open to working with you on bigger projects or features.
Please, use GitHub Issues liberally or email me. "Issues" can be:
- a "dumb" question (my favorite kind) or a complicated one.
- any comment or suggestion for the documentation or the code.
- a cool thing that you did with RNAvigate.
- an actual issue, such as a bug or an unclear error
- a request for help:
- acheiving a desired vizualization or analysis
- performing a chemical probing experiment
- a feature request, such as:
- handling a new file format
- creating a new kind visualization