Build PhaseProbe v0.1.0

[aliengineering-byte]

Summary

• build the complete PhaseProbe v0.1.0 deterministic simulation-regression CLI
• add logistic-map, Lorenz, predator–prey, and genetic-toggle adapters with positive and negative controls
• add replay fixtures, pytest generation, JSON/HTML reports, packaging, governance, prior-art, scientific-method, and limitation documentation
• add Windows/Linux CI across Python 3.10, 3.12, and 3.14 plus tagged-release artifact verification
• add terminal demo assets and a 1280×640 social preview

Local validation

• uv lock --check
• uv sync --frozen --all-extras
• python -m ruff format --check .
• python -m ruff check .
• python -m mypy src tests
• python -m pytest --cov=phaseprobe --cov-report=term-missing — 38 passed, 87.92% coverage
• python scripts/hygiene.py
• python scripts/check_links.py
• wheel/sdist content inspection and clean wheel smoke test

Release safety

Private research, local toolchains, environments, caches, run artifacts, build output, and PDFs are ignored and absent from the 77-file tracked surface.