A free, open-source, globally available tool for DNA sequence screening
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May 22, 2026 - Python
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biosecurity
Here are 39 public repositories matching this topic...
Implementation of FoldMark: Safeguarding Protein Structure Generative Models with Distributional and Evolutionary Watermarking
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Apr 19, 2026 - Python
Injecting watermarks to protein sequences for privacy protection in biosecurity
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Oct 1, 2024 - Jupyter Notebook
Pre-etiologic zoonotic-spillover risk forecasting at 25 km tile resolution. Methodology, 25-event validation cohort, 8-layer governance framework, MCP server source, regulatory pathway. Aqta Technologies Limited (Dublin).
mcp fhir public-health xgboost epidemiology shap one-health biosecurity ai-governance pandemic-preparedness early-warning zoonotic-spillover
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May 22, 2026 - Python
Fast multi-threaded sequence filtration using k-mers
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Mar 30, 2026 - Rust
Reference-free, privacy-preserving wastewater pathogen surveillance for federated hospital networks. DNABERT-2 embeddings + Transformer-encoder VAE detect emerging anomaly clusters in unclassified reads. AIxBio Hackathon Track 2, Apart Research.
bioinformatics deep-learning metagenomics public-health anomaly-detection variational-autoencoder hackathon-project federated-learning pathogen-detection biosecurity wastewater-surveillance pandemic-preparedness dnabert aixbio
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Apr 29, 2026 - Jupyter Notebook
Biosecurity retrieval compendium — ESM-2 homology cliff analysis, 5 papers, 4 pre-registrations, 9360 per-cell results, SHA-256 manifest
reproducibility homology pre-registration reproducibility-challenge biosecurity esm-2 homology-protein-modelling reproducibility-research
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May 25, 2026 - Python
A Progressive Web App for biosecurity management in cattle & poultry farms. Features risk assessment, disease alerts, multilingual support (Hindi/English), and offline functionality. Built for Ministry of Fisheries Hackathon.
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Jan 2, 2026 - JavaScript
Invariant is an open-source, cryptographic command-validation firewall that sits between AI models and actuators to provide provable, deterministic safety profiles and append-only signed audit logs for physical systems like robotics and biosynthesis lines.
cryptography robotics rust-lang industrial-automation formal-verification cos ai-safety autonomous-systems zero-trust cyber-physical-systems hardware-security audit-logging biosynthesis humanoid-robotics lean4 biosecurity physical-ai bsl-gating
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May 25, 2026 - Rust
CRC-Screen: Certified DNA-Synthesis Hazard Screening Under Taxonomic Shift
ai-safety conformal-prediction biosecurity dna-screening llm-as-judge calibrated-classification conformal-risk-control
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May 4, 2026 - Python
A data science platform for various problems in coronavirus research.
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May 1, 2026 - Python
The website for biosecurity.world
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May 18, 2026 - PHP
Project MOSAIC provides an open-source, Protein-Aware Mock Screener tool designed to defend against "context-scrubbed" multi-agent LLM workflows.
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Apr 27, 2026 - Python
SeqScreen wrapper exposing the biosurveillance pipeline as MCP tools. Built for the Apart AI × Biosecurity Hackathon, April 2026.
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Apr 25, 2026 - HTML
Fruit fly introduction risk dashboard for USDA APHIS PPQ. Dual frontend: Leaflet.js geospatial dashboard + Streamlit analytics platform (Poisson GLM, Pseudo-R² 0.68). Covers 6 invasive species across air passenger & cargo pathways. USDA × CSU Hackathon 2026.
python agriculture hackathon leaflet geospatial invasive-species usda poisson-regression streamlit risk-modeling biosecurity fruit-fly aphis phytosanitary
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Apr 30, 2026 - Python
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May 13, 2026 - Rust
Farm Stochastic Risk Analysis
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Jan 21, 2026 - R
Investigation into ML explainability/interpretability techniques, analysing the behaviour of ML models trained to predict whether a medical abstract is or is not related to pathogens.
python nlp machine-learning scikit-learn transformers pytorch pubmed bag-of-words research-project bert lime interpretable-ai shap captum biosecurity model-explainability aixbio
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Feb 1, 2026 - Jupyter Notebook
Mapping the distribution of high-containment laboratories and projected climate-related hazards
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Nov 21, 2025 - HTML
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