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Pull requests: zrt219/BioNeMo-Operations-Lab

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Pull requests list

⚡ Bolt: Memoize clinical context lexicon compilation
#31 opened Jul 30, 2026 by zrt219 Owner • Draft
2
⚡ Bolt: [performance improvement] Memoize NLP Lexicons & Regex Compilation
#30 opened Jul 29, 2026 by zrt219 Owner • Draft
2
⚡ Bolt: Cache deterministic context lexicons for NLP processing
#29 opened Jul 28, 2026 by zrt219 Owner • Draft
2
⚡ Bolt: [performance improvement] Memoize regex pattern and lexicon generation
#28 opened Jul 27, 2026 by zrt219 Owner • Draft
2
⚡ Bolt: Memoize compiled context lexicon
#27 opened Jul 25, 2026 by zrt219 Owner • Draft
2
⚡ Bolt: Cache section header alias lookups
#26 opened Jul 24, 2026 by zrt219 Owner • Draft
2
⚡ Bolt: Cache Context Lexicon Regex Compilation
#25 opened Jul 23, 2026 by zrt219 Owner • Draft
2
⚡ Bolt: [memoize context lexicon regex compilation]
#24 opened Jul 22, 2026 by zrt219 Owner • Draft
2
⚡ Bolt: [performance improvement] Cache compiled ConText lexicons
#23 opened Jul 21, 2026 by zrt219 Owner • Draft
2
Implement Deterministic Backend Trust Engine for BioNeMo Dashboard
#22 opened Jul 19, 2026 by zrt219 Owner • Draft
2
🧪 Add tests for deidentify_write_stream in spark_streaming.py
#21 opened Jul 19, 2026 by zrt219 Owner • Draft
2
🧪 add test for redact_ndjson_lines in log_redactor
#20 opened Jul 19, 2026 by zrt219 Owner Loading…
2
🧹 Refactor artifact creation logic in bionemo_scientist.py
#19 opened Jul 19, 2026 by zrt219 Owner Loading…
2
🧹 Refactor main execution logic in bionemo_scientist.py
#18 opened Jul 19, 2026 by zrt219 Owner Loading…
2
⚡ Optimize database table existence checks to avoid N+1 schema queries
#16 opened Jul 19, 2026 by zrt219 Owner Loading…
2
🧹 Remove unused env_present function
#14 opened Jul 19, 2026 by zrt219 Owner Loading…
2
🧪 [testing] Enhance test coverage for log redactor stream integrations
#13 opened Jul 19, 2026 by zrt219 Owner Loading…
2
🔒 Fix Insecure Deserialization in KERMT Vocab Loader
#12 opened Jul 19, 2026 by zrt219 Owner Loading…
2
🧪 [testing] Add test for BadZipFile exception in epub.py
#10 opened Jul 19, 2026 by zrt219 Owner Loading…
2
⚡ Cache regex compilation to optimize custom recognizer performance
#9 opened Jul 19, 2026 by zrt219 Owner Loading…
2
⚡ Optimize OMOP schema creation with batched DDL execution
#8 opened Jul 19, 2026 by zrt219 Owner Loading…
2
🧪 [testing improvement] Add missing file rasterizer test in verify_pdf
#7 opened Jul 19, 2026 by zrt219 Owner Loading…
2
🧪 [testing improvement description] Add test for write_deidentified_stream
#6 opened Jul 19, 2026 by zrt219 Owner Loading…
2
🧹 Refactor duplicated requests.post logic into helper function
#5 opened Jul 19, 2026 by zrt219 Owner Loading…
2
🧹 [Code Health] Refactor build_comparison_report to improve readability
#4 opened Jul 19, 2026 by zrt219 Owner Loading…
2
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