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Ensure edge table is populated

Status: Open.

#331 In EnzymeFunctionInitiative/EST;

· nilsoberg opened on May 22, 2026

Verify that generatessn works with AS=0

prio:high

Status: Open.

#330 In EnzymeFunctionInitiative/EST;

· nilsoberg opened on May 22, 2026

Too many edges for number of nodes

bug

prio:high

Status: Open.

Bug

#327 In EnzymeFunctionInitiative/EST;

· rbdavid opened on May 18, 2026

Machine-readable error codes

Status: Open.

#311 In EnzymeFunctionInitiative/EST;

· nilsoberg opened on Apr 27, 2026

Update job scheduler specific configs

enhancement

prio:high

Status: Open.

Task

#301 In EnzymeFunctionInitiative/EST;

· rbdavid opened on Apr 17, 2026

Potentially refactor ALL_BY_ALL workflow to always run condense/expand processes

prio:low

Status: Open.

#296 In EnzymeFunctionInitiative/EST;

· rbdavid opened on Apr 10, 2026

Split accession ids list in est.nf split_sequence_ids process block

prio:low

Status: Open.

#295 In EnzymeFunctionInitiative/EST;

· rbdavid opened on Apr 10, 2026

Investigate MUSCLE version discrepancies

prio:low

Status: Open.

#266 In EnzymeFunctionInitiative/EST;

· nilsoberg opened on Feb 13, 2026

Update documentation

documentation

prio:low

Status: Open.

Task

#247 In EnzymeFunctionInitiative/EST;

· rbdavid opened on Jan 9, 2026

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Backlog

Shouldn't you remove the requirements for fasta-db?

Status: Open.

#245 In EnzymeFunctionInitiative/EST;

· miko8422 opened on Jan 8, 2026

·  

Backlog

Create output JSON for dynamic job display

Status: Open.

#234 In EnzymeFunctionInitiative/EST;

· nilsoberg opened on Dec 8, 2025

Revisit domain filtering

prio:high

Status: Open.

#231 In EnzymeFunctionInitiative/EST;

· rbdavid opened on Dec 4, 2025